Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs6903015 | chr6:26322526 | A/G | ZFP57 | chr6:29640169-29648887:- | 0.52 | 6.2 | 1.24E-9 | Box Plot |
| THCA | rs6903652 | chr6:28322120 | C/G | ZFP57 | chr6:29640169-29648887:- | 0.37 | 6.02 | 3.41E-9 | Box Plot |
| THCA | rs6903973 | chr6:26499942 | C/A | ZNF322B | chr9:99957633-99961910:- | 0.54 | 10.2 | 3.09E-22 | Box Plot |
| THCA | rs6904102 | chr6:26587909 | A/T | ZNF322B | chr9:99957633-99961910:- | 0.6 | 8.99 | 5.79E-18 | Box Plot |
| THCA | rs6904424 | chr6:116660240 | C/G | ECSIT | chr19:11616731-11639989:- | -0.23 | -6.34 | 5.45E-10 | Box Plot |
| THCA | rs6904596 | chr6:27491299 | G/A | BTN3A2 | chr6:26365387-26378548:+ | -0.65 | -10.4 | 5.65E-23 | Box Plot |
| THCA | rs6904596 | chr6:27491299 | G/A | ZFP57 | chr6:29640169-29648887:- | 0.68 | 7.41 | 5.85E-13 | Box Plot |
| THCA | rs6905391 | chr6:28262686 | G/A | BTN3A2 | chr6:26365387-26378548:+ | -0.47 | -9.24 | 7.9E-19 | Box Plot |
| THCA | rs6905516 | chr6:28086478 | A/G | BTN3A2 | chr6:26365387-26378548:+ | -0.29 | -6.1 | 2.25E-9 | Box Plot |
| THCA | rs6905522 | chr6:28086479 | A/C | BTN3A2 | chr6:26365387-26378548:+ | -0.29 | -6.1 | 2.25E-9 | Box Plot |
| THCA | rs6906521 | chr6:26478909 | T/C | ZNF322B | chr9:99957633-99961910:- | 0.5 | 7.1 | 4.56E-12 | Box Plot |
| THCA | rs6907139 | chr6:7000498 | G/T | IDO1 | chr8:39759794-39785963:+ | 0.26 | 5.9 | 7.06E-9 | Box Plot |
| THCA | rs6908156 | chr6:26322861 | C/T | HCG4 | chr6:29759530-29760527:- | -0.49 | -5.92 | 6.09E-9 | Box Plot |
| THCA | rs6908156 | chr6:26322861 | C/T | ZFP57 | chr6:29640169-29648887:- | 0.52 | 6.2 | 1.24E-9 | Box Plot |
| THCA | rs6908839 | chr6:124511758 | A/G | SIGIRR | chr11:405716-417455:- | 0.52 | 6.21 | 1.13E-9 | Box Plot |